Category:Bioinformatics: Difference between revisions

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# [[BioPerl]]
# [[BioPerl]]
# [[Fetching_Fasta]]
# [[Fetching_Fasta]]
# [http://jura.wi.mit.edu/bio/education/bioinfo/pages/perl_bioinfo.html Some_Perl_examples]
===MySql===
===MySql===
# [[Mysql_commands]]
# [[Mysql_commands]]

Revision as of 01:56, 17 July 2010

Bio ITC Projects

  1. Ortho-SSR-Euca
  2. Transcriptomics-Tobacco
  3. GenePrediction-Euca
  4. Tilling_Genes
  5. SBase Genes | Water use efficiency
  6. Casuarina Genome initiative

Bio Other Projects

  1. Ppea-EST
  2. Sangar_split | Raja, Canada
  3. Soghum Physical mapping | EST-GDNA | Rajendrakumar | DRR, Hyderabad
  4. Heterosis Genes Synteny | Rice-wheat-maize on Sorghum | RK | DRR, Hyderabad
  5. BES-NR_Blast_Flax | Flax BES blast against Non Redundant database
  6. Parse_EST-BES_Flax | Parse the required parameters from Blast Output

My Perl

  1. PerlTemplate
  2. split_file
  3. Fix_digits
  4. count_fasta_characters
  5. Multithreading
  6. Transpose

BioPerl

  1. BioPerl
  2. Fetching_Fasta
  3. Some_Perl_examples

MySql

  1. Mysql_commands
  2. Phpmyadmin
  3. perl-mysql

Shell

  1. Shell

Software Implementation