Category:Bioinformatics: Difference between revisions

From RAJ INFO
Jump to navigation Jump to search
Line 11: Line 11:
# [[Soghum Physical mapping]] | EST-GDNA | Rajendrakumar | DRR, Hyderabad
# [[Soghum Physical mapping]] | EST-GDNA | Rajendrakumar | DRR, Hyderabad
# [[Heterosis Genes Synteny]] | Rice-wheat-maize on Sorghum | RK | DRR, Hyderabad
# [[Heterosis Genes Synteny]] | Rice-wheat-maize on Sorghum | RK | DRR, Hyderabad
# [[BES-NR_Blast_Flax]] | Flax BES blast against Non Redundant database
# [[Parse_EST-BES_Flax]] | Parse the required parameters from Blast Output


=== My Perl===
=== My Perl===

Revision as of 12:00, 15 July 2010

Bio ITC Projects

  1. Ortho-SSR-Euca
  2. Transcriptomics-Tobacco
  3. GenePrediction-Euca
  4. Tilling_Genes
  5. SBase Genes | Water use efficiency
  6. Casuarina Genome initiative

Bio Other Projects

  1. Ppea-EST
  2. Sangar_split | Raja, Canada
  3. Soghum Physical mapping | EST-GDNA | Rajendrakumar | DRR, Hyderabad
  4. Heterosis Genes Synteny | Rice-wheat-maize on Sorghum | RK | DRR, Hyderabad
  5. BES-NR_Blast_Flax | Flax BES blast against Non Redundant database
  6. Parse_EST-BES_Flax | Parse the required parameters from Blast Output

My Perl

  1. PerlTemplate
  2. split_file
  3. Fix_digits
  4. count_fasta_characters
  5. Multithreading
  6. Transpose

BioPerl

  1. BioPerl
  2. Fetching_Fasta

MySql

  1. Mysql_commands
  2. Phpmyadmin
  3. perl-mysql

Shell

  1. Shell

Software Implementation