Tilling Genes: Difference between revisions
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| Line 5: | Line 5: | ||
* Identify SNP | * Identify SNP | ||
* Screen the mutants with specific strategy | * Screen the mutants with specific strategy | ||
=Conformation of Selected Genes= | =Conformation of Selected Genes= | ||
* Blast against methylated (TGI) sequences | * Blast against methylated (TGI) sequences | ||
Revision as of 18:09, 5 January 2010
TILLING is to identify the mutants with trait of interest.
Strategy
- Develop a TILLING population
- Select/isolate the gene of interest (direct or orthologous)
- Identify SNP
- Screen the mutants with specific strategy
Conformation of Selected Genes
- Blast against methylated (TGI) sequences
- 7 selected genes
- Blastn against TGI []
- Results
Query id, Subject id, % identity, alignment length, mismatches, gap openings, q. start, q. end, s. start, s. end, e-value, bit score ANTL_AY461432 CHO_OF4928xj19r1.ab1 99.39 654 2 2 1676 2327 848 195 0.0 1189