Tilling Genes: Difference between revisions

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** Results
** Results
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# Fields: Query id, Subject id, % identity, alignment length, mismatches, gap openings, q. start, q. end, s. start, s. end, e-value, bit score
ANTL_AY461432 CHO_OF4928xj19r1.ab1 99.39 654 2 2 1676 2327 848 195 0.0 1189


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Revision as of 17:51, 5 January 2010

TILLING is to identify the mutants with trait of interest.

Strategy

  • Develop a TILLING population
  • Select/isolate the gene of interest (direct or orthologous)
  • Identify SNP
  • Screen the mutants with specific strategy

Conformation of Selected Genes

  • Blast against methylated (TGI) sequences
    • 7 selected genes
    • Blastn against TGI []
    • Results
# Fields: Query id, Subject id, % identity, alignment length, mismatches, gap openings, q. start, q. end, s. start, s. end, e-value, bit score
ANTL_AY461432	CHO_OF4928xj19r1.ab1	99.39	654	2	2	1676	2327	848	195	0.0	1189