Heterosis Genes Synteny

• OBJ
  • Get the synteny of Heterosis genes across rice wheat and maize
  • Map them on sorghum genome
  • Use the Heterotic genes
• Strategy
  • Generate Blast Co-ordinates of Rice;Wheat;Maize->Sorghum
  • Count the Sorphum Genome- Chromosomewise total bases
  • Plot them them on circos
  • Plot all the Blast Co-ordinates on circos
  • Picout the consenses on sorghum
• Scripts
  • heterosis_blast.pl | multi-threaded; parse included