Heterosis Genes Synteny: Difference between revisions
Jump to navigation
Jump to search
Created page with 'Category:Bioinformatics * OBJ ** Get the synteny of Heterosis genes across rice wheat and maize ** Map them on sorghum genome ** Use the Heterotic genes * Scripts ** [[hete…' |
No edit summary |
||
| Line 5: | Line 5: | ||
** Map them on sorghum genome | ** Map them on sorghum genome | ||
** Use the Heterotic genes | ** Use the Heterotic genes | ||
* Strategy | |||
** Generate Blast Co-ordinates of Rice;Wheat;Maize->Sorghum | |||
** Count the Sorphum Genome- Chromosomewise total bases | |||
** Plot them them on circos | |||
** Plot all the Blast Co-ordinates on circos | |||
** Picout the consenses on sorghum | |||
* Scripts | * Scripts | ||
** [[heterosis_blast.pl]] | multi-threaded; parse included | ** [[heterosis_blast.pl]] | multi-threaded; parse included | ||
Latest revision as of 18:24, 15 April 2010
- OBJ
- Get the synteny of Heterosis genes across rice wheat and maize
- Map them on sorghum genome
- Use the Heterotic genes
- Strategy
- Generate Blast Co-ordinates of Rice;Wheat;Maize->Sorghum
- Count the Sorphum Genome- Chromosomewise total bases
- Plot them them on circos
- Plot all the Blast Co-ordinates on circos
- Picout the consenses on sorghum
- Scripts
- heterosis_blast.pl | multi-threaded; parse included